Package: RRphylo
Type: Package
Title: Phylogenetic Ridge Regression Methods for Comparative Studies
Date: 2026-01-09
Version: 3.0.2
Authors@R: c(person(given = "Pasquale",
                    family = "Raia",
                    role = "aut"),
             person(given = "Silvia",
                    family = "Castiglione",
                    role = c("aut","cre"),
                    email = "silvia.castiglione@unina.it"),
             person(given = "Carmela",
                    family = "Serio",
                    role = "aut"),
             person(given = "Giorgia",
                    family = "Girardi",
                    role = "aut"),
             person(given = "Alessandro",
                    family = "Mondanaro",
                    role = "aut"),
             person(given = "Marina",
                    family = "Melchionna",
                    role = "aut"),
             person(given = "Mirko",
                    family = "Di Febbraro",
                    role = "aut"),
             person(given = "Antonio",
                    family = "Profico",
                    role = "aut"),
             person(given = "Francesco",
                    family = "Carotenuto",
                    role = "aut"))
Maintainer: Silvia Castiglione <silvia.castiglione@unina.it>
Description: Functions for phylogenetic analysis (Castiglione et al.,
        2018 <doi:10.1111/2041-210X.12954>). The functions perform the
        estimation of phenotypic evolutionary rates, identification of
        phenotypic evolutionary rate shifts, quantification of
        direction and size of evolutionary change in multivariate
        traits, the computation of ontogenetic shape vectors and test
        for morphological convergence.
License: GPL-2
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0), emmeans(>= 1.4.3)
Imports: ape, phytools, foreach, doParallel, parallel
Suggests: phangorn, rlist, scales, R.utils, cluster, RColorBrewer,
        nlme, car, smatr, picante, vegan, ddpcr, geomorph, rmarkdown,
        knitr, kableExtra, plotrix, pdftools, rgl, mvMORPH, ggplot2,
        qpdf, inflection, Rvcg, Morpho, evolqg, manipulate, markdown,
        Rphylopars, phylolm, webshot2, testthat (>= 3.0.0)
VignetteBuilder: knitr
RoxygenNote: 7.3.3
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://pasraia.r-universe.dev
Date/Publication: 2026-01-09 11:55:12 UTC
RemoteUrl: https://github.com/pasraia/rrphylo
RemoteRef: HEAD
RemoteSha: b12cc19c7d116cb7acaa6fc321cc8b55e2d0e460
NeedsCompilation: no
Packaged: 2026-06-08 08:12:17 UTC; root
Author: Pasquale Raia [aut],
  Silvia Castiglione [aut, cre],
  Carmela Serio [aut],
  Giorgia Girardi [aut],
  Alessandro Mondanaro [aut],
  Marina Melchionna [aut],
  Mirko Di Febbraro [aut],
  Antonio Profico [aut],
  Francesco Carotenuto [aut]